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{{Header Nav|game=Mega Man Zero}}
{{Header Nav|game=Mega Man Zero}}


One characteristic of ''Mega Man Zero'' is the fact that most stages are the setting for two missions. This feature is not found in any other game in the [[:Category:Mega Man|Mega Man series and subseries]].
Of course, enemies are different during the second mission in the same area; in some cases, the stage is also navigated backwards.
<center>
{|{{prettytable|notwide=1|text center=1}}
! Area !! 1st mission & boss !! 2nd mission & boss
|-
! Underground laboratoty
| [[Mega Man Zero/Underground Laboratory|Mission 1 ''(nameless)'']] — the Golem
| [[Mega Man Zero/Retrieve Data|Retrieve Data]] — Maha Ganeshariff
|-
! Disposal center
| [[Mega Man Zero/Disposal Center|Mission 2 ''(nameless)'']] — Aztec Falcon
| [[Mega Man Zero/Disposal Center (revisited)|Mission 7 ''(nameless)'']] — the Giant Mechaniloid
|-
! Subway
| [[Mega Man Zero/Destroy the Train|Destroy the Train]] — the Train Engine
| [[Mega Man Zero/Rescue Colbor-Corbeau|Rescue Colbor-Corbeau]] — Harpuia
|-
! Factory
| [[Mega Man Zero/Occupy Factory|Occupy Factory]] — the Guard Hydra
| [[Mega Man Zero/Protect the Factory|Protect the Factory]] — Phantom
|-
! Desert
| [[Mega Man Zero/Find the Shuttle|Find the Shuttle]] — Anubis Necromancess III
| [[Mega Man Zero/Duel in the Desert|Duel in the Desert]] — Fefnir
|-
! Hidden base
| [[Mega Man Zero/Find Hidden Base|Find Hidden Base]] — Blizzack Staggroff
| [[Mega Man Zero/Stop the Hacking|Stop the Hacking]] — Leviathan
|-
!colspan=3| Final stages
|-
! Resistance base
| {{n/a|-}}
| [[Mega Man Zero/Resistance Base (attacked)|Mission 13 ''(nameless)'']] — Hanumachine
|-
! Neo Arcadia Shrine
| [[Mega Man Zero/Neo Arcadia Shrine|Neo Arcadia Shrine]] — Herculious Anchortus
| {{n/a|-}}
|-
! Neo Arcadia Tower
| [[Mega Man Zero/Neo Arcadia Tower|Neo Arcadia Tower]] — the Rainbow Devil
| {{n/a|-}}
|-
! Neo Arcadia Core
| [[Mega Man Zero/Neo Arcadia Core|Neo Arcadia Core]] — Copy X
| {{n/a|-}}
|}
</center>
Another characteristic is that when you clear one stage, one or more new stages are unlocked, in a fashion similar to ''[[Mega Man & Bass]]''. This feature was lost in the subsequent ''{{c|Mega Man Zero}}'' games.
[[File:MMZ1-missions-diagram.png|frame|center|The graphics from ''[[Mega Man & Bass]]'' were chosen to highlight the similarity.]]
== Suggested order ==
The suggested order of the mission was compiled according to the following criteria:
The suggested order of the mission was compiled according to the following criteria:
# [[Mega Man Zero/Escape the Laboratory|Escape the Laboratory]]
# [[Mega Man Zero/Underground Laboratory|Mission 1 - the Golem]]
# [[Mega Man Zero/Rescue the Reploids|Rescue the Reploids]] - Boss drops Thunder Chip
# [[Mega Man Zero/Disposal Center|Mission 2 - Aztec Falcon]]: Boss drops Thunder Chip
# [[Mega Man Zero/Destroy the Train|Destroy the Train]] - Boss weak against Thunder Chip; unlocks mission for Flame Chip
#* ''12. [[Mega Man Zero/Retrieve Data|Retrieve Data - Maha Ganeshariff]]: in '''Jackson Mode''' and '''Ultimate (Easy) Mode''', obtain the weapons earlier.''
# [[Mega Man Zero/Occupy Factory|Occupy Factory]] - Boss drops Flame Chip
# [[Mega Man Zero/Destroy the Train|Destroy the Train - the train engine]]: Boss weak against Thunder Chip; unlocks mission for Flame Chip
# [[Mega Man Zero/Find the Shuttle|Find the Shuttle]] - Boss weak against Flame Chip; unlocks mission for Ice Chip
# [[Mega Man Zero/Occupy Factory|Occupy Factory - the hydra guardian]]: Boss drops Flame Chip
# [[Mega Man Zero/Find Hidden Base|Find Hidden Base]] - Boss weak against Flame Chip; drops Ice Chip
# [[Mega Man Zero/Find the Shuttle|Find the Shuttle - Anubis Necromancess III]]: Boss weak against Flame Chip; unlocks mission for Ice Chip
# [[Mega Man Zero/Stop the Mechaniloid!|Stop the Mechaniloid!]]
# [[Mega Man Zero/Find Hidden Base|Find Hidden Base - Blizzack Staggroff]]: Boss weak against Flame Chip; drops Ice Chip
# [[Mega Man Zero/Rescue Colbor/Corbeau|Rescue Colbor/Corbeau]] - Boss weak against Ice Chip
# [[Mega Man Zero/Disposal Center (revisited)|Mission 7 - the giant mechaniloid]]: ''(Stage 2 revisited)''
# [[Mega Man Zero/Duel in the Desert|Duel in the Desert]] - Boss weak against Thunder Chip
# [[Mega Man Zero/Rescue Colbor-Corbeau|Rescue Colbor-Corbeau - Harpuia]]: Stage 3 revisited; boss weak against Ice Chip
# [[Mega Man Zero/Protect the Factory|Protect the Factory]]
# [[Mega Man Zero/Protect the Factory|Protect the Factory - Phantom]]: Stage 4 revisited
# [[Mega Man Zero/Stop the Hacking|Stop the Hacking]] - Boss weak against Flame Chip
# [[Mega Man Zero/Duel in the Desert|Duel in the Desert - Fefnir]]: Stage 5 revisited
## Fast crystal collection from quickly regenerating spiders disappear from Underground Laboratory after completing the next mission
# [[Mega Man Zero/Stop the Hacking|Stop the Hacking - Leviathan]]: Stage 6 revisited
# [[Mega Man Zero/Retrieve Data|Retrieve Data]]
# [[Mega Man Zero/Retrieve Data|Retrieve Data - Maha Ganeshariff]]: Fast crystal collection from quickly regenerating spiders disappears from Underground Laboratory after completing this mission.
# [[Mega Man Zero/Save the Base!|Save the Base!]]
* '''Final stages:'''
# [[Mega Man Zero/Neo Arcadia Shrine|Neo Arcadia Shrine]]
** 13. [[Mega Man Zero/Resistance Base (attacked)|Mission 13 - Hanumachine]]
# [[Mega Man Zero/Neo Arcadia Tower|Neo Arcadia Tower]]
** 14. [[Mega Man Zero/Neo Arcadia Shrine|Neo Arcadia Shrine - Herculious Anchortus]]
# [[Mega Man Zero/Neo Arcadia Core|Neo Arcadia Core]]
** 15. [[Mega Man Zero/Neo Arcadia Tower|Neo Arcadia Tower - Rainbow Devil]]
** 16. [[Mega Man Zero/Neo Arcadia Core|Neo Arcadia Core - Copy X]]


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